Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Sox17Q61473 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.58■□□□□ 0.09
Sox17Q61473 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.58■□□□□ 0.08
Sox17Q61473 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.58■□□□□ 0.08
Sox17Q61473 Gm5408-201ENSMUST00000197998 747 ntBASIC15.58■□□□□ 0.08
Sox17Q61473 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.58■□□□□ 0.08
Sox17Q61473 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Sox17Q61473 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox17Q61473 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox17Q61473 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Sox17Q61473 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Sox17Q61473 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox17Q61473 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Sox17Q61473 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox17Q61473 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.57■□□□□ 0.08
Sox17Q61473 Gm42569-201ENSMUST00000200539 472 ntBASIC15.57■□□□□ 0.08
Sox17Q61473 Gm2559-201ENSMUST00000201323 363 ntBASIC15.57■□□□□ 0.08
Sox17Q61473 Gm42545-201ENSMUST00000202755 922 ntBASIC15.57■□□□□ 0.08
Sox17Q61473 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.57■□□□□ 0.08
Sox17Q61473 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox17Q61473 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox17Q61473 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox17Q61473 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox17Q61473 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox17Q61473 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sox17Q61473 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Sox17Q61473 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Sox17Q61473 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.57■□□□□ 0.08
Sox17Q61473 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Sox17Q61473 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Gm4974-201ENSMUST00000209974 875 ntBASIC15.56■□□□□ 0.08
Sox17Q61473 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Sox17Q61473 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Sox17Q61473 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.56■□□□□ 0.08
Sox17Q61473 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sox17Q61473 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Sox17Q61473 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.55■□□□□ 0.08
Sox17Q61473 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Sox17Q61473 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.55■□□□□ 0.08
Sox17Q61473 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 Dio3-201ENSMUST00000097228 1449 ntBASIC15.55■□□□□ 0.08
Sox17Q61473 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.55■□□□□ 0.08
Sox17Q61473 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox17Q61473 Mir5133-201ENSMUST00000174955 77 ntBASIC15.55■□□□□ 0.08
Sox17Q61473 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.55■□□□□ 0.08
Sox17Q61473 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox17Q61473 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sox17Q61473 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sox17Q61473 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sox17Q61473 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sox17Q61473 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sox17Q61473 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms