Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Six4Q61321 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Six4Q61321 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Six4Q61321 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Six4Q61321 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Six4Q61321 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.7■□□□□ 0.26
Six4Q61321 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Six4Q61321 Gm29518-201ENSMUST00000190858 372 ntBASIC16.7■□□□□ 0.26
Six4Q61321 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Gm17808-201ENSMUST00000200859 894 ntBASIC16.7■□□□□ 0.26
Six4Q61321 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Six4Q61321 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Six4Q61321 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Six4Q61321 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Six4Q61321 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Six4Q61321 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.7■□□□□ 0.26
Six4Q61321 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Six4Q61321 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Six4Q61321 Gm6623-201ENSMUST00000173570 544 ntBASIC16.69■□□□□ 0.26
Six4Q61321 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.69■□□□□ 0.26
Six4Q61321 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Six4Q61321 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.69■□□□□ 0.26
Six4Q61321 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.69■□□□□ 0.26
Six4Q61321 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Six4Q61321 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Six4Q61321 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Six4Q61321 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Six4Q61321 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Six4Q61321 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Six4Q61321 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Six4Q61321 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Six4Q61321 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Six4Q61321 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Six4Q61321 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Six4Q61321 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Six4Q61321 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Six4Q61321 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Six4Q61321 Gm11950-201ENSMUST00000121615 838 ntBASIC16.67■□□□□ 0.26
Six4Q61321 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.67■□□□□ 0.26
Six4Q61321 Gm25016-201ENSMUST00000158399 131 ntBASIC16.67■□□□□ 0.26
Six4Q61321 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Six4Q61321 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Six4Q61321 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Six4Q61321 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Six4Q61321 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Six4Q61321 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms