Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scnn1aQ61180 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Scnn1aQ61180 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scnn1aQ61180 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19■□□□□ 0.63
Scnn1aQ61180 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Scnn1aQ61180 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Scnn1aQ61180 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scnn1aQ61180 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scnn1aQ61180 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Scnn1aQ61180 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scnn1aQ61180 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scnn1aQ61180 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Scnn1aQ61180 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.99■□□□□ 0.63
Scnn1aQ61180 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Scnn1aQ61180 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scnn1aQ61180 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Scnn1aQ61180 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scnn1aQ61180 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.98■□□□□ 0.63
Scnn1aQ61180 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scnn1aQ61180 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scnn1aQ61180 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scnn1aQ61180 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scnn1aQ61180 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Scnn1aQ61180 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.97■□□□□ 0.63
Scnn1aQ61180 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scnn1aQ61180 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.97■□□□□ 0.63
Scnn1aQ61180 Gm44771-201ENSMUST00000206975 626 ntBASIC18.97■□□□□ 0.63
Scnn1aQ61180 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.97■□□□□ 0.63
Scnn1aQ61180 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scnn1aQ61180 Rps4l-201ENSMUST00000071745 943 ntBASIC18.97■□□□□ 0.63
Scnn1aQ61180 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scnn1aQ61180 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scnn1aQ61180 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scnn1aQ61180 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.96■□□□□ 0.63
Scnn1aQ61180 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.96■□□□□ 0.63
Scnn1aQ61180 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.96■□□□□ 0.63
Scnn1aQ61180 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.96■□□□□ 0.63
Scnn1aQ61180 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scnn1aQ61180 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.95■□□□□ 0.62
Scnn1aQ61180 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.95■□□□□ 0.62
Scnn1aQ61180 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scnn1aQ61180 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms