Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Irf9Q61179 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.55■□□□□ 0.88
Irf9Q61179 Gm44454-201ENSMUST00000198541 138 ntBASIC20.55■□□□□ 0.88
Irf9Q61179 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Irf9Q61179 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Irf9Q61179 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf9Q61179 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.54■□□□□ 0.88
Irf9Q61179 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf9Q61179 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf9Q61179 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf9Q61179 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf9Q61179 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf9Q61179 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Irf9Q61179 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Irf9Q61179 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Irf9Q61179 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.54■□□□□ 0.88
Irf9Q61179 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf9Q61179 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.54■□□□□ 0.88
Irf9Q61179 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.54■□□□□ 0.88
Irf9Q61179 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf9Q61179 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Irf9Q61179 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.53■□□□□ 0.88
Irf9Q61179 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Gm27867-201ENSMUST00000184778 125 ntBASIC20.53■□□□□ 0.88
Irf9Q61179 Gm36967-201ENSMUST00000193814 266 ntBASIC20.53■□□□□ 0.88
Irf9Q61179 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Irf9Q61179 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Irf9Q61179 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Irf9Q61179 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Irf9Q61179 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Irf9Q61179 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.53■□□□□ 0.88
Irf9Q61179 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Irf9Q61179 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf9Q61179 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Irf9Q61179 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Irf9Q61179 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf9Q61179 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
Irf9Q61179 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf9Q61179 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf9Q61179 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf9Q61179 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.52■□□□□ 0.88
Irf9Q61179 Gm15165-201ENSMUST00000118140 502 ntBASIC20.52■□□□□ 0.88
Irf9Q61179 Gm12644-201ENSMUST00000119935 606 ntBASIC20.52■□□□□ 0.88
Irf9Q61179 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.52■□□□□ 0.88
Irf9Q61179 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Irf9Q61179 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.52■□□□□ 0.88
Irf9Q61179 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.52■□□□□ 0.88
Irf9Q61179 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.52■□□□□ 0.88
Irf9Q61179 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.52■□□□□ 0.88
Irf9Q61179 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.52■□□□□ 0.88
Irf9Q61179 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf9Q61179 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf9Q61179 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf9Q61179 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Irf9Q61179 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Irf9Q61179 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Irf9Q61179 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.52■□□□□ 0.87
Irf9Q61179 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.51■□□□□ 0.87
Irf9Q61179 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.51■□□□□ 0.87
Irf9Q61179 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Irf9Q61179 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Irf9Q61179 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf9Q61179 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.5■□□□□ 0.87
Irf9Q61179 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Irf9Q61179 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Irf9Q61179 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.5■□□□□ 0.87
Irf9Q61179 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf9Q61179 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf9Q61179 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Irf9Q61179 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.5■□□□□ 0.87
Irf9Q61179 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.5■□□□□ 0.87
Irf9Q61179 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf9Q61179 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Irf9Q61179 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Irf9Q61179 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.5■□□□□ 0.87
Irf9Q61179 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms