Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Satb1Q60611 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Satb1Q60611 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Satb1Q60611 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.1■□□□□ 0.33
Satb1Q60611 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Satb1Q60611 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Satb1Q60611 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Satb1Q60611 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Satb1Q60611 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Satb1Q60611 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.09■□□□□ 0.33
Satb1Q60611 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Satb1Q60611 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.09■□□□□ 0.33
Satb1Q60611 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.09■□□□□ 0.33
Satb1Q60611 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.09■□□□□ 0.33
Satb1Q60611 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.09■□□□□ 0.33
Satb1Q60611 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Satb1Q60611 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.09■□□□□ 0.33
Satb1Q60611 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Satb1Q60611 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Satb1Q60611 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Satb1Q60611 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Satb1Q60611 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Satb1Q60611 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Satb1Q60611 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Satb1Q60611 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.08■□□□□ 0.32
Satb1Q60611 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Satb1Q60611 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Satb1Q60611 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.07■□□□□ 0.32
Satb1Q60611 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Satb1Q60611 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Gm2756-201ENSMUST00000195851 400 ntBASIC17.07■□□□□ 0.32
Satb1Q60611 Gm29791-202ENSMUST00000207888 369 ntBASIC17.07■□□□□ 0.32
Satb1Q60611 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.07■□□□□ 0.32
Satb1Q60611 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Satb1Q60611 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Satb1Q60611 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Gm23935-201ENSMUST00000102303 57 ntBASIC17.06■□□□□ 0.32
Satb1Q60611 Gm24270-201ENSMUST00000102326 57 ntBASIC17.06■□□□□ 0.32
Satb1Q60611 Gm11779-201ENSMUST00000118541 368 ntBASIC17.06■□□□□ 0.32
Satb1Q60611 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.06■□□□□ 0.32
Satb1Q60611 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Satb1Q60611 Gm24245-201ENSMUST00000157318 57 ntBASIC17.06■□□□□ 0.32
Satb1Q60611 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms