Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim38Q5SZ99 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim38Q5SZ99 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim38Q5SZ99 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim38Q5SZ99 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim38Q5SZ99 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim38Q5SZ99 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim38Q5SZ99 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Trim38Q5SZ99 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim38Q5SZ99 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim38Q5SZ99 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Mir1668-201ENSMUST00000184114 107 ntBASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim38Q5SZ99 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim38Q5SZ99 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms