Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vps54Q5SPW0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vps54Q5SPW0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.85■□□□□ 0.77
Vps54Q5SPW0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps54Q5SPW0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.85■□□□□ 0.77
Vps54Q5SPW0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Vps54Q5SPW0 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.85■□□□□ 0.77
Vps54Q5SPW0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps54Q5SPW0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps54Q5SPW0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Vps54Q5SPW0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vps54Q5SPW0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Vps54Q5SPW0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Vps54Q5SPW0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vps54Q5SPW0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vps54Q5SPW0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.83■□□□□ 0.76
Vps54Q5SPW0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps54Q5SPW0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps54Q5SPW0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Vps54Q5SPW0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vps54Q5SPW0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.81■□□□□ 0.76
Vps54Q5SPW0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vps54Q5SPW0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Vps54Q5SPW0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps54Q5SPW0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps54Q5SPW0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vps54Q5SPW0 Gm13216-201ENSMUST00000117145 591 ntBASIC19.8■□□□□ 0.76
Vps54Q5SPW0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Vps54Q5SPW0 Gm17807-201ENSMUST00000186869 298 ntBASIC19.8■□□□□ 0.76
Vps54Q5SPW0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms