Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-4Q5R1I0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-4Q5R1I0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-4Q5R1I0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Trav6d-4Q5R1I0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-4Q5R1I0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-4Q5R1I0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-4Q5R1I0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-4Q5R1I0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-4Q5R1I0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6d-4Q5R1I0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav6d-4Q5R1I0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav6d-4Q5R1I0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6d-4Q5R1I0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Gm15794-201ENSMUST00000120182 631 ntBASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Olfr129-201ENSMUST00000122318 993 ntBASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav6d-4Q5R1I0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Mir3081-201ENSMUST00000175305 84 ntBASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.87□□□□□ -0.19
Trav6d-4Q5R1I0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav6d-4Q5R1I0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms