Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm3375-201ENSMUST00000203929 796 ntBASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-3Q5R1E6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav6-3Q5R1E6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-3Q5R1E6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav6-3Q5R1E6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-3Q5R1E6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-3Q5R1E6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-3Q5R1E6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-3Q5R1E6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Trav6-3Q5R1E6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav6-3Q5R1E6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav6-3Q5R1E6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Trav6-3Q5R1E6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Gm715-201ENSMUST00000117865 831 ntBASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Actl10-202ENSMUST00000226583 1501 ntBASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav6-3Q5R1E6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Gm13186-201ENSMUST00000118031 316 ntBASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Gm27463-201ENSMUST00000183569 57 ntBASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Gm8520-201ENSMUST00000186517 868 ntBASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav6-3Q5R1E6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav6-3Q5R1E6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms