Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Trim80Q3V061 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim80Q3V061 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim80Q3V061 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trim80Q3V061 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim80Q3V061 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim80Q3V061 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.11■□□□□ 0.33
Trim80Q3V061 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim80Q3V061 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim80Q3V061 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Trim80Q3V061 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trim80Q3V061 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.11■□□□□ 0.33
Trim80Q3V061 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim80Q3V061 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim80Q3V061 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim80Q3V061 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim80Q3V061 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim80Q3V061 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim80Q3V061 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim80Q3V061 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Mir5122-201ENSMUST00000175004 89 ntBASIC17.1■□□□□ 0.33
Trim80Q3V061 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.1■□□□□ 0.33
Trim80Q3V061 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.1■□□□□ 0.33
Trim80Q3V061 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim80Q3V061 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim80Q3V061 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim80Q3V061 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim80Q3V061 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim80Q3V061 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim80Q3V061 Gm9987-201ENSMUST00000069768 567 ntBASIC17.09■□□□□ 0.33
Trim80Q3V061 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Trim80Q3V061 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim80Q3V061 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim80Q3V061 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim80Q3V061 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim80Q3V061 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim80Q3V061 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trim80Q3V061 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim80Q3V061 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim80Q3V061 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim80Q3V061 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.08■□□□□ 0.33
Trim80Q3V061 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms