Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.22■□□□□ 0.03
Spg11Q3UHA3 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.22■□□□□ 0.03
Spg11Q3UHA3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Spg11Q3UHA3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Spg11Q3UHA3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Spg11Q3UHA3 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.21■□□□□ 0.03
Spg11Q3UHA3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Spg11Q3UHA3 Gm9794-201ENSMUST00000202370 423 ntBASIC15.21■□□□□ 0.03
Spg11Q3UHA3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Spg11Q3UHA3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.21■□□□□ 0.03
Spg11Q3UHA3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.21■□□□□ 0.03
Spg11Q3UHA3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Spg11Q3UHA3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Spg11Q3UHA3 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.21■□□□□ 0.03
Spg11Q3UHA3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
Spg11Q3UHA3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Spg11Q3UHA3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Spg11Q3UHA3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Spg11Q3UHA3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.21■□□□□ 0.02
Spg11Q3UHA3 Gm18889-201ENSMUST00000174284 929 ntBASIC15.21■□□□□ 0.02
Spg11Q3UHA3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Spg11Q3UHA3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Spg11Q3UHA3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Spg11Q3UHA3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Spg11Q3UHA3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Grk6-207ENSMUST00000225925 2769 ntBASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Spg11Q3UHA3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Gm4899-201ENSMUST00000178708 719 ntBASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Gm5177-201ENSMUST00000183092 997 ntBASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Gm25406-201ENSMUST00000157599 105 ntBASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Spg11Q3UHA3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Gm43125-201ENSMUST00000201724 730 ntBASIC15.18■□□□□ 0.02
Spg11Q3UHA3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Rprl2-201ENSMUST00000157150 290 ntBASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Gm27430-201ENSMUST00000184585 107 ntBASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Gm44333-201ENSMUST00000197168 107 ntBASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Gm7774-201ENSMUST00000200064 533 ntBASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Spg11Q3UHA3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms