Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Gm43183-201ENSMUST00000200632 547 ntBASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Fndc4Q3TR08 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Fndc4Q3TR08 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Fndc4Q3TR08 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Fndc4Q3TR08 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms