Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Auts2-212ENSMUST00000178555 309 ntBASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Gm27628-201ENSMUST00000184911 107 ntBASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim7Q3TJD7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim7Q3TJD7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Gm13036-201ENSMUST00000117799 748 ntBASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.54■□□□□ 0.56
Pdlim7Q3TJD7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Gm25911-201ENSMUST00000157621 56 ntBASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pdlim7Q3TJD7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pdlim7Q3TJD7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pdlim7Q3TJD7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pdlim7Q3TJD7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.52■□□□□ 0.55
Pdlim7Q3TJD7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 Gm8097-201ENSMUST00000117903 829 ntBASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pdlim7Q3TJD7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms