Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.29■□□□□ 0.2
Q3KNL4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Q3KNL4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q3KNL4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Q3KNL4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Q3KNL4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Q3KNL4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Q3KNL4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.28■□□□□ 0.2
Q3KNL4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Q3KNL4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q3KNL4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q3KNL4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.28■□□□□ 0.2
Q3KNL4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.28■□□□□ 0.2
Q3KNL4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q3KNL4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.28■□□□□ 0.2
Q3KNL4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q3KNL4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.28■□□□□ 0.2
Q3KNL4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q3KNL4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q3KNL4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
Q3KNL4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q3KNL4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q3KNL4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.28■□□□□ 0.2
Q3KNL4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q3KNL4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Q3KNL4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q3KNL4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q3KNL4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q3KNL4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q3KNL4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q3KNL4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q3KNL4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q3KNL4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Q3KNL4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Q3KNL4 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.27■□□□□ 0.2
Q3KNL4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Q3KNL4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Q3KNL4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.27■□□□□ 0.2
Q3KNL4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.27■□□□□ 0.2
Q3KNL4 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.27■□□□□ 0.2
Q3KNL4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.27■□□□□ 0.2
Q3KNL4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q3KNL4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q3KNL4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q3KNL4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Q3KNL4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Q3KNL4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Q3KNL4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Q3KNL4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Q3KNL4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.19
Q3KNL4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Q3KNL4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Q3KNL4 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Q3KNL4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.26■□□□□ 0.19
Q3KNL4 Timm23-208ENSMUST00000226683 750 ntBASIC16.26■□□□□ 0.19
Q3KNL4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Q3KNL4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Q3KNL4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Q3KNL4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q3KNL4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q3KNL4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.25■□□□□ 0.19
Q3KNL4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Q3KNL4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q3KNL4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q3KNL4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Q3KNL4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q3KNL4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q3KNL4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q3KNL4 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.25■□□□□ 0.19
Q3KNL4 Il3ra-202ENSMUST00000223589 738 ntBASIC16.25■□□□□ 0.19
Q3KNL4 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.25■□□□□ 0.19
Q3KNL4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Q3KNL4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Q3KNL4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q3KNL4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Q3KNL4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.25■□□□□ 0.19
Q3KNL4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q3KNL4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q3KNL4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Q3KNL4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Q3KNL4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Q3KNL4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms