Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Gm27300-201ENSMUST00000184085 97 ntBASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Gm27335-201ENSMUST00000184758 97 ntBASIC17.6■□□□□ 0.41
Col19a1Q0VF58 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Gm9172-201ENSMUST00000212092 954 ntBASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col19a1Q0VF58 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col19a1Q0VF58 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Col19a1Q0VF58 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col19a1Q0VF58 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col19a1Q0VF58 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.59■□□□□ 0.41
Col19a1Q0VF58 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col19a1Q0VF58 Gm44492-201ENSMUST00000197012 141 ntBASIC17.59■□□□□ 0.41
Col19a1Q0VF58 Gm45167-201ENSMUST00000208007 322 ntBASIC17.59■□□□□ 0.41
Col19a1Q0VF58 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col19a1Q0VF58 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col19a1Q0VF58 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col19a1Q0VF58 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col19a1Q0VF58 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.59■□□□□ 0.41
Col19a1Q0VF58 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col19a1Q0VF58 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.58■□□□□ 0.4
Col19a1Q0VF58 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.58■□□□□ 0.4
Col19a1Q0VF58 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Gm11764-201ENSMUST00000120221 623 ntBASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col19a1Q0VF58 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col19a1Q0VF58 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.56■□□□□ 0.4
Col19a1Q0VF58 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col19a1Q0VF58 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col19a1Q0VF58 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.56■□□□□ 0.4
Col19a1Q0VF58 Gm25406-201ENSMUST00000157599 105 ntBASIC17.56■□□□□ 0.4
Col19a1Q0VF58 Gm17968-201ENSMUST00000194902 784 ntBASIC17.56■□□□□ 0.4
Col19a1Q0VF58 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.56■□□□□ 0.4
Col19a1Q0VF58 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col19a1Q0VF58 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col19a1Q0VF58 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col19a1Q0VF58 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Gm27494-201ENSMUST00000184735 189 ntBASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col19a1Q0VF58 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms