Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.68□□□□□ -0.22
Gfra1P97785 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.68□□□□□ -0.22
Gfra1P97785 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gfra1P97785 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Gfra1P97785 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.68□□□□□ -0.22
Gfra1P97785 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.68□□□□□ -0.22
Gfra1P97785 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Gfra1P97785 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Gfra1P97785 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Gfra1P97785 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.67□□□□□ -0.22
Gfra1P97785 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Phf7-203ENSMUST00000226565 1971 ntBASIC13.67□□□□□ -0.22
Gfra1P97785 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Gfra1P97785 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Gfra1P97785 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.67□□□□□ -0.22
Gfra1P97785 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.67□□□□□ -0.22
Gfra1P97785 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Gfra1P97785 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Gfra1P97785 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.66□□□□□ -0.22
Gfra1P97785 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Gfra1P97785 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.66□□□□□ -0.22
Gfra1P97785 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.66□□□□□ -0.22
Gfra1P97785 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.66□□□□□ -0.22
Gfra1P97785 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Gfra1P97785 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Gfra1P97785 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Gfra1P97785 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Gfra1P97785 Gm9103-201ENSMUST00000119371 405 ntBASIC13.65□□□□□ -0.22
Gfra1P97785 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Gfra1P97785 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Ank2-226ENSMUST00000189368 339 ntBASIC13.65□□□□□ -0.22
Gfra1P97785 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.65□□□□□ -0.22
Gfra1P97785 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Gfra1P97785 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Gfra1P97785 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.64□□□□□ -0.23
Gfra1P97785 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.64□□□□□ -0.23
Gfra1P97785 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Gfra1P97785 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.64□□□□□ -0.23
Gfra1P97785 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Gfra1P97785 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms