Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.23■□□□□ 0.03
Cacna1aP97445 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Cacna1aP97445 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Gm29707-201ENSMUST00000196325 491 ntBASIC15.23■□□□□ 0.03
Cacna1aP97445 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cacna1aP97445 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.23■□□□□ 0.03
Cacna1aP97445 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Gm12260-201ENSMUST00000122447 411 ntBASIC15.22■□□□□ 0.03
Cacna1aP97445 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.22■□□□□ 0.03
Cacna1aP97445 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.22■□□□□ 0.03
Cacna1aP97445 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.22■□□□□ 0.03
Cacna1aP97445 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cacna1aP97445 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cacna1aP97445 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.22■□□□□ 0.03
Cacna1aP97445 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.22■□□□□ 0.03
Cacna1aP97445 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cacna1aP97445 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cacna1aP97445 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1aP97445 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1aP97445 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1aP97445 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1aP97445 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1aP97445 Gm26308-201ENSMUST00000157768 69 ntBASIC15.21■□□□□ 0.03
Cacna1aP97445 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1aP97445 Gm43767-201ENSMUST00000198933 381 ntBASIC15.21■□□□□ 0.03
Cacna1aP97445 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.21■□□□□ 0.03
Cacna1aP97445 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1aP97445 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1aP97445 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1aP97445 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.21■□□□□ 0.03
Cacna1aP97445 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1aP97445 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1aP97445 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cacna1aP97445 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1aP97445 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cacna1aP97445 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cacna1aP97445 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.21■□□□□ 0.02
Cacna1aP97445 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Cacna1aP97445 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cacna1aP97445 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Cacna1aP97445 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1aP97445 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1aP97445 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1aP97445 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.2■□□□□ 0.02
Cacna1aP97445 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.2■□□□□ 0.02
Cacna1aP97445 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.2■□□□□ 0.02
Cacna1aP97445 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1aP97445 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cacna1aP97445 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1aP97445 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1aP97445 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1aP97445 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1aP97445 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.2■□□□□ 0.02
Cacna1aP97445 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.2■□□□□ 0.02
Cacna1aP97445 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.2■□□□□ 0.02
Cacna1aP97445 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1aP97445 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.2■□□□□ 0.02
Cacna1aP97445 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.2■□□□□ 0.02
Cacna1aP97445 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.2■□□□□ 0.02
Cacna1aP97445 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1aP97445 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cacna1aP97445 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1aP97445 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.19■□□□□ 0.02
Cacna1aP97445 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1aP97445 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms