Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.8■□□□□ 0.92
Nkx2-3P97334 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Nkx2-3P97334 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-3P97334 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.79■□□□□ 0.92
Nkx2-3P97334 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-3P97334 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.79■□□□□ 0.92
Nkx2-3P97334 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Nkx2-3P97334 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.79■□□□□ 0.92
Nkx2-3P97334 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-3P97334 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-3P97334 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.79■□□□□ 0.92
Nkx2-3P97334 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.79■□□□□ 0.92
Nkx2-3P97334 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-3P97334 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-3P97334 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-3P97334 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-3P97334 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-3P97334 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-3P97334 Gm8097-201ENSMUST00000117903 829 ntBASIC20.78■□□□□ 0.92
Nkx2-3P97334 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.78■□□□□ 0.92
Nkx2-3P97334 Gm7230-201ENSMUST00000173026 815 ntBASIC20.78■□□□□ 0.92
Nkx2-3P97334 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.78■□□□□ 0.92
Nkx2-3P97334 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-3P97334 Gm15590-201ENSMUST00000078419 552 ntBASIC20.78■□□□□ 0.92
Nkx2-3P97334 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Nkx2-3P97334 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-3P97334 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-3P97334 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-3P97334 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.78■□□□□ 0.92
Nkx2-3P97334 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-3P97334 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.78■□□□□ 0.92
Nkx2-3P97334 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-3P97334 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-3P97334 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.77■□□□□ 0.92
Nkx2-3P97334 Gm15173-201ENSMUST00000122049 433 ntBASIC20.77■□□□□ 0.92
Nkx2-3P97334 Gm11594-201ENSMUST00000122313 162 ntBASIC20.77■□□□□ 0.92
Nkx2-3P97334 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Nkx2-3P97334 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-3P97334 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.77■□□□□ 0.92
Nkx2-3P97334 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.77■□□□□ 0.92
Nkx2-3P97334 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx2-3P97334 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.77■□□□□ 0.92
Nkx2-3P97334 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nkx2-3P97334 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.76■□□□□ 0.91
Nkx2-3P97334 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.76■□□□□ 0.91
Nkx2-3P97334 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Gm6089-201ENSMUST00000197666 938 ntBASIC20.76■□□□□ 0.91
Nkx2-3P97334 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC20.76■□□□□ 0.91
Nkx2-3P97334 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-3P97334 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-3P97334 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.75■□□□□ 0.91
Nkx2-3P97334 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.75■□□□□ 0.91
Nkx2-3P97334 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Gm25925-201ENSMUST00000158314 306 ntBASIC20.75■□□□□ 0.91
Nkx2-3P97334 Gm37935-201ENSMUST00000192012 982 ntBASIC20.75■□□□□ 0.91
Nkx2-3P97334 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 AC159106.1-201ENSMUST00000224421 690 ntBASIC20.75■□□□□ 0.91
Nkx2-3P97334 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-3P97334 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-3P97334 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-3P97334 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-3P97334 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-3P97334 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nkx2-3P97334 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms