Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh6P97326 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh6P97326 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cdh6P97326 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Cdh6P97326 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh6P97326 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh6P97326 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.77■□□□□ 0.28
Cdh6P97326 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Cdh6P97326 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh6P97326 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh6P97326 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh6P97326 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdh6P97326 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdh6P97326 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Gm6659-201ENSMUST00000174752 547 ntBASIC16.76■□□□□ 0.27
Cdh6P97326 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdh6P97326 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.76■□□□□ 0.27
Cdh6P97326 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh6P97326 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Cdh6P97326 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.75■□□□□ 0.27
Cdh6P97326 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Cdh6P97326 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.75■□□□□ 0.27
Cdh6P97326 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cdh6P97326 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cdh6P97326 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdh6P97326 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cdh6P97326 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh6P97326 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.74■□□□□ 0.27
Cdh6P97326 Haglr-201ENSMUST00000100000 2085 ntBASIC16.74■□□□□ 0.27
Cdh6P97326 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cdh6P97326 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdh6P97326 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cdh6P97326 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cdh6P97326 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.74■□□□□ 0.27
Cdh6P97326 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdh6P97326 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdh6P97326 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdh6P97326 Gm5587-201ENSMUST00000206270 674 ntBASIC16.74■□□□□ 0.27
Cdh6P97326 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Cdh6P97326 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh6P97326 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cdh6P97326 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh6P97326 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh6P97326 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh6P97326 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cdh6P97326 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh6P97326 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh6P97326 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh6P97326 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh6P97326 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Cdh6P97326 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh6P97326 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh6P97326 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.73■□□□□ 0.27
Cdh6P97326 Gm25016-201ENSMUST00000158399 131 ntBASIC16.73■□□□□ 0.27
Cdh6P97326 Gm23634-201ENSMUST00000175071 91 ntBASIC16.73■□□□□ 0.27
Cdh6P97326 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cdh6P97326 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms