Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm11860-201ENSMUST00000122346 1010 ntBASIC18■□□□□ 0.47
Trim43cP86449 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim43cP86449 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18■□□□□ 0.47
Trim43cP86449 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18■□□□□ 0.47
Trim43cP86449 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Trim43cP86449 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim43cP86449 Gm27389-201ENSMUST00000183622 195 ntBASIC18■□□□□ 0.47
Trim43cP86449 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim43cP86449 Gm18101-201ENSMUST00000215769 548 ntBASIC18■□□□□ 0.47
Trim43cP86449 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim43cP86449 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim43cP86449 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trim43cP86449 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trim43cP86449 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.99■□□□□ 0.47
Trim43cP86449 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.99■□□□□ 0.47
Trim43cP86449 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Trim43cP86449 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Trim43cP86449 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim43cP86449 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.99■□□□□ 0.47
Trim43cP86449 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trim43cP86449 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim43cP86449 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim43cP86449 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Gm11355-201ENSMUST00000121120 306 ntBASIC17.98■□□□□ 0.47
Trim43cP86449 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.98■□□□□ 0.47
Trim43cP86449 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim43cP86449 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Trim43cP86449 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim43cP86449 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim43cP86449 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim43cP86449 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.97■□□□□ 0.47
Trim43cP86449 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.97■□□□□ 0.47
Trim43cP86449 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim43cP86449 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim43cP86449 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim43cP86449 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim43cP86449 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim43cP86449 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.96■□□□□ 0.47
Trim43cP86449 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 Gm10013-201ENSMUST00000106074 672 ntBASIC17.96■□□□□ 0.47
Trim43cP86449 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.96■□□□□ 0.47
Trim43cP86449 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 Mir7071-201ENSMUST00000184847 69 ntBASIC17.96■□□□□ 0.47
Trim43cP86449 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.96■□□□□ 0.47
Trim43cP86449 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim43cP86449 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim43cP86449 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43cP86449 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.96■□□□□ 0.47
Trim43cP86449 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms