Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.78□□□□□ -0.04
SgcbP82349 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.77□□□□□ -0.04
SgcbP82349 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgcbP82349 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.77□□□□□ -0.04
SgcbP82349 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgcbP82349 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SgcbP82349 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgcbP82349 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SgcbP82349 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgcbP82349 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SgcbP82349 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SgcbP82349 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgcbP82349 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SgcbP82349 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SgcbP82349 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SgcbP82349 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SgcbP82349 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgcbP82349 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SgcbP82349 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgcbP82349 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgcbP82349 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgcbP82349 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SgcbP82349 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SgcbP82349 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcbP82349 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.76□□□□□ -0.05
SgcbP82349 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcbP82349 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcbP82349 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SgcbP82349 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcbP82349 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SgcbP82349 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcbP82349 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcbP82349 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcbP82349 Gm6623-201ENSMUST00000173570 544 ntBASIC14.76□□□□□ -0.05
SgcbP82349 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
SgcbP82349 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.76□□□□□ -0.05
SgcbP82349 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.76□□□□□ -0.05
SgcbP82349 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.76□□□□□ -0.05
SgcbP82349 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcbP82349 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SgcbP82349 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcbP82349 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SgcbP82349 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SgcbP82349 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgcbP82349 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.76□□□□□ -0.05
SgcbP82349 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.75□□□□□ -0.05
SgcbP82349 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Gm6345-202ENSMUST00000180900 204 ntBASIC14.75□□□□□ -0.05
SgcbP82349 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.75□□□□□ -0.05
SgcbP82349 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SgcbP82349 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.75□□□□□ -0.05
SgcbP82349 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.75□□□□□ -0.05
SgcbP82349 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SgcbP82349 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
SgcbP82349 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SgcbP82349 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SgcbP82349 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SgcbP82349 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SgcbP82349 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SgcbP82349 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.74□□□□□ -0.05
SgcbP82349 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SgcbP82349 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SgcbP82349 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SgcbP82349 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SgcbP82349 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
SgcbP82349 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SgcbP82349 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SgcbP82349 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SgcbP82349 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms