Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm15372-201ENSMUST00000120729 834 ntBASIC17.91■□□□□ 0.46
CiitaP79621 Gm12895-201ENSMUST00000122214 226 ntBASIC17.91■□□□□ 0.46
CiitaP79621 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.91■□□□□ 0.46
CiitaP79621 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CiitaP79621 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
CiitaP79621 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.91■□□□□ 0.46
CiitaP79621 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
CiitaP79621 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CiitaP79621 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CiitaP79621 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CiitaP79621 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CiitaP79621 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CiitaP79621 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CiitaP79621 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CiitaP79621 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CiitaP79621 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CiitaP79621 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CiitaP79621 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CiitaP79621 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CiitaP79621 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CiitaP79621 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CiitaP79621 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CiitaP79621 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CiitaP79621 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CiitaP79621 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CiitaP79621 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CiitaP79621 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CiitaP79621 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CiitaP79621 Gm34391-201ENSMUST00000203706 907 ntBASIC17.89■□□□□ 0.45
CiitaP79621 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.89■□□□□ 0.45
CiitaP79621 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CiitaP79621 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CiitaP79621 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CiitaP79621 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CiitaP79621 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CiitaP79621 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CiitaP79621 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CiitaP79621 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CiitaP79621 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CiitaP79621 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.89■□□□□ 0.45
CiitaP79621 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CiitaP79621 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.88■□□□□ 0.45
CiitaP79621 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CiitaP79621 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CiitaP79621 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CiitaP79621 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CiitaP79621 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.87■□□□□ 0.45
CiitaP79621 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CiitaP79621 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CiitaP79621 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CiitaP79621 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CiitaP79621 Gm7153-201ENSMUST00000117092 455 ntBASIC17.87■□□□□ 0.45
CiitaP79621 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CiitaP79621 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
CiitaP79621 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CiitaP79621 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CiitaP79621 Birc2-201ENSMUST00000054878 378 ntBASIC17.87■□□□□ 0.45
CiitaP79621 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CiitaP79621 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CiitaP79621 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CiitaP79621 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CiitaP79621 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CiitaP79621 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CiitaP79621 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CiitaP79621 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CiitaP79621 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CiitaP79621 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CiitaP79621 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CiitaP79621 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CiitaP79621 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CiitaP79621 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CiitaP79621 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CiitaP79621 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms