Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.25■□□□□ 0.19
Lhx1P63006 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Gm44430-201ENSMUST00000203376 995 ntBASIC16.25■□□□□ 0.19
Lhx1P63006 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Lhx1P63006 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Lhx1P63006 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Lhx1P63006 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx1P63006 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.24■□□□□ 0.19
Lhx1P63006 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx1P63006 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx1P63006 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.24■□□□□ 0.19
Lhx1P63006 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Lhx1P63006 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lhx1P63006 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx1P63006 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.24■□□□□ 0.19
Lhx1P63006 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Lhx1P63006 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx1P63006 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx1P63006 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx1P63006 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx1P63006 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx1P63006 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Lhx1P63006 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx1P63006 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lhx1P63006 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.24■□□□□ 0.19
Lhx1P63006 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx1P63006 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx1P63006 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx1P63006 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx1P63006 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Lhx1P63006 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Lhx1P63006 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx1P63006 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx1P63006 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Lhx1P63006 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.23■□□□□ 0.19
Lhx1P63006 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx1P63006 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.23■□□□□ 0.19
Lhx1P63006 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.23■□□□□ 0.19
Lhx1P63006 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx1P63006 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.23■□□□□ 0.19
Lhx1P63006 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx1P63006 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx1P63006 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Lhx1P63006 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Lhx1P63006 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx1P63006 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx1P63006 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lhx1P63006 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Lhx1P63006 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx1P63006 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx1P63006 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx1P63006 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx1P63006 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx1P63006 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx1P63006 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx1P63006 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx1P63006 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.22■□□□□ 0.19
Lhx1P63006 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.22■□□□□ 0.19
Lhx1P63006 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lhx1P63006 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx1P63006 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.22■□□□□ 0.19
Lhx1P63006 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.22■□□□□ 0.19
Lhx1P63006 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx1P63006 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx1P63006 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx1P63006 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx1P63006 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx1P63006 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.21■□□□□ 0.19
Lhx1P63006 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx1P63006 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx1P63006 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx1P63006 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx1P63006 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lhx1P63006 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Lhx1P63006 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lhx1P63006 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lhx1P63006 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lhx1P63006 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx1P63006 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.2■□□□□ 0.18
Lhx1P63006 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx1P63006 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx1P63006 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.2■□□□□ 0.18
Lhx1P63006 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx1P63006 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lhx1P63006 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx1P63006 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx1P63006 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lhx1P63006 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lhx1P63006 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.2■□□□□ 0.18
Lhx1P63006 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lhx1P63006 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.2■□□□□ 0.18
Lhx1P63006 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms