Protein–RNA interactions for Protein: P60229

Eif3e, Eukaryotic translation initiation factor 3 subunit E, mousemouse

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eif3eP60229 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eif3eP60229 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eif3eP60229 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Eif3eP60229 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eif3eP60229 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eif3eP60229 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eif3eP60229 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.09■□□□□ 0.33
Eif3eP60229 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Eif3eP60229 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Eif3eP60229 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Eif3eP60229 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Eif3eP60229 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.08■□□□□ 0.33
Eif3eP60229 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.08■□□□□ 0.33
Eif3eP60229 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Eif3eP60229 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eif3eP60229 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eif3eP60229 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Eif3eP60229 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eif3eP60229 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eif3eP60229 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.08■□□□□ 0.32
Eif3eP60229 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Eif3eP60229 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.08■□□□□ 0.32
Eif3eP60229 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eif3eP60229 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eif3eP60229 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.08■□□□□ 0.32
Eif3eP60229 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eif3eP60229 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Eif3eP60229 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.08■□□□□ 0.32
Eif3eP60229 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eif3eP60229 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eif3eP60229 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Eif3eP60229 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Eif3eP60229 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Eif3eP60229 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.07■□□□□ 0.32
Eif3eP60229 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Eif3eP60229 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Eif3eP60229 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.07■□□□□ 0.32
Eif3eP60229 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.07■□□□□ 0.32
Eif3eP60229 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Eif3eP60229 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Eif3eP60229 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Eif3eP60229 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Eif3eP60229 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.06■□□□□ 0.32
Eif3eP60229 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.06■□□□□ 0.32
Eif3eP60229 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Eif3eP60229 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Eif3eP60229 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Eif3eP60229 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.06■□□□□ 0.32
Eif3eP60229 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.06■□□□□ 0.32
Eif3eP60229 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.06■□□□□ 0.32
Eif3eP60229 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Eif3eP60229 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.06■□□□□ 0.32
Eif3eP60229 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.06■□□□□ 0.32
Eif3eP60229 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Eif3eP60229 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.06■□□□□ 0.32
Eif3eP60229 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.06■□□□□ 0.32
Eif3eP60229 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Eif3eP60229 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Eif3eP60229 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Eif3eP60229 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Eif3eP60229 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Eif3eP60229 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Eif3eP60229 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Eif3eP60229 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Eif3eP60229 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Eif3eP60229 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Eif3eP60229 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Eif3eP60229 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Eif3eP60229 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.05■□□□□ 0.32
Eif3eP60229 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms