Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.67■□□□□ 0.58
Rrp1P56183 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.67■□□□□ 0.58
Rrp1P56183 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rrp1P56183 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rrp1P56183 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rrp1P56183 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.67■□□□□ 0.58
Rrp1P56183 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rrp1P56183 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rrp1P56183 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rrp1P56183 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rrp1P56183 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Rrp1P56183 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.67■□□□□ 0.58
Rrp1P56183 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rrp1P56183 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rrp1P56183 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Rrp1P56183 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp1P56183 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp1P56183 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp1P56183 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rrp1P56183 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp1P56183 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp1P56183 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.66■□□□□ 0.58
Rrp1P56183 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.66■□□□□ 0.58
Rrp1P56183 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Rrp1P56183 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp1P56183 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp1P56183 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.66■□□□□ 0.58
Rrp1P56183 Gm7791-201ENSMUST00000219066 539 ntBASIC18.66■□□□□ 0.58
Rrp1P56183 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp1P56183 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rrp1P56183 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp1P56183 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp1P56183 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp1P56183 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rrp1P56183 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rrp1P56183 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rrp1P56183 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Rrp1P56183 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.65■□□□□ 0.58
Rrp1P56183 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rrp1P56183 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rrp1P56183 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.65■□□□□ 0.58
Rrp1P56183 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Rrp1P56183 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.65■□□□□ 0.58
Rrp1P56183 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rrp1P56183 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp1P56183 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp1P56183 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Rrp1P56183 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp1P56183 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp1P56183 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Rrp1P56183 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.64■□□□□ 0.57
Rrp1P56183 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Rrp1P56183 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp1P56183 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp1P56183 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rrp1P56183 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rrp1P56183 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rrp1P56183 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Rrp1P56183 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.63■□□□□ 0.57
Rrp1P56183 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.63■□□□□ 0.57
Rrp1P56183 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Rrp1P56183 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rrp1P56183 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.62■□□□□ 0.57
Rrp1P56183 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.62■□□□□ 0.57
Rrp1P56183 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rrp1P56183 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms