Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.27■□□□□ 0.67
Cacnb3P54285 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Cacnb3P54285 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacnb3P54285 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacnb3P54285 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacnb3P54285 Gm12350-201ENSMUST00000121208 462 ntBASIC19.26■□□□□ 0.67
Cacnb3P54285 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacnb3P54285 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacnb3P54285 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.26■□□□□ 0.67
Cacnb3P54285 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacnb3P54285 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cacnb3P54285 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.26■□□□□ 0.67
Cacnb3P54285 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cacnb3P54285 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacnb3P54285 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacnb3P54285 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacnb3P54285 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacnb3P54285 Rarb-207ENSMUST00000225921 2756 ntBASIC19.26■□□□□ 0.67
Cacnb3P54285 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cacnb3P54285 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacnb3P54285 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacnb3P54285 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacnb3P54285 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.24■□□□□ 0.67
Cacnb3P54285 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Cacnb3P54285 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cacnb3P54285 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacnb3P54285 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.24■□□□□ 0.67
Cacnb3P54285 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.24■□□□□ 0.67
Cacnb3P54285 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacnb3P54285 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacnb3P54285 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacnb3P54285 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacnb3P54285 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacnb3P54285 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacnb3P54285 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacnb3P54285 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacnb3P54285 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Cacnb3P54285 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacnb3P54285 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacnb3P54285 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacnb3P54285 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacnb3P54285 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.23■□□□□ 0.67
Cacnb3P54285 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.23■□□□□ 0.67
Cacnb3P54285 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.23■□□□□ 0.67
Cacnb3P54285 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cacnb3P54285 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacnb3P54285 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacnb3P54285 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacnb3P54285 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacnb3P54285 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacnb3P54285 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacnb3P54285 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacnb3P54285 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Cacnb3P54285 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacnb3P54285 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacnb3P54285 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacnb3P54285 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacnb3P54285 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacnb3P54285 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Cacnb3P54285 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cacnb3P54285 Gm13418-201ENSMUST00000119097 944 ntBASIC19.22■□□□□ 0.67
Cacnb3P54285 Gm25925-201ENSMUST00000158314 306 ntBASIC19.22■□□□□ 0.67
Cacnb3P54285 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.22■□□□□ 0.67
Cacnb3P54285 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.22■□□□□ 0.67
Cacnb3P54285 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacnb3P54285 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacnb3P54285 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cacnb3P54285 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacnb3P54285 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacnb3P54285 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacnb3P54285 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacnb3P54285 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacnb3P54285 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacnb3P54285 Gm11594-201ENSMUST00000122313 162 ntBASIC19.21■□□□□ 0.67
Cacnb3P54285 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.21■□□□□ 0.67
Cacnb3P54285 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.21■□□□□ 0.67
Cacnb3P54285 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.21■□□□□ 0.67
Cacnb3P54285 Gm5364-201ENSMUST00000216789 889 ntBASIC19.21■□□□□ 0.67
Cacnb3P54285 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacnb3P54285 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacnb3P54285 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacnb3P54285 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacnb3P54285 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.21■□□□□ 0.67
Cacnb3P54285 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Cacnb3P54285 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacnb3P54285 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms