Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nek1P51954 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nek1P51954 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Nek1P51954 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.45■□□□□ 0.54
Nek1P51954 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nek1P51954 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nek1P51954 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Nek1P51954 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Nek1P51954 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nek1P51954 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.44■□□□□ 0.54
Nek1P51954 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.44■□□□□ 0.54
Nek1P51954 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.44■□□□□ 0.54
Nek1P51954 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Nek1P51954 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nek1P51954 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.44■□□□□ 0.54
Nek1P51954 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.43■□□□□ 0.54
Nek1P51954 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nek1P51954 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Gm7791-201ENSMUST00000219066 539 ntBASIC18.43■□□□□ 0.54
Nek1P51954 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nek1P51954 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nek1P51954 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.42■□□□□ 0.54
Nek1P51954 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nek1P51954 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Gm23634-201ENSMUST00000175071 91 ntBASIC18.42■□□□□ 0.54
Nek1P51954 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.42■□□□□ 0.54
Nek1P51954 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.42■□□□□ 0.54
Nek1P51954 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Nek1P51954 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nek1P51954 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.41■□□□□ 0.54
Nek1P51954 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nek1P51954 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Gm18958-201ENSMUST00000174258 762 ntBASIC18.41■□□□□ 0.54
Nek1P51954 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.41■□□□□ 0.54
Nek1P51954 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nek1P51954 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms