Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.62■□□□□ 0.73
Ercc3P49135 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.62■□□□□ 0.73
Ercc3P49135 Gm5587-201ENSMUST00000206270 674 ntBASIC19.62■□□□□ 0.73
Ercc3P49135 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ercc3P49135 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ercc3P49135 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc3P49135 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc3P49135 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.61■□□□□ 0.73
Ercc3P49135 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc3P49135 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc3P49135 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ercc3P49135 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc3P49135 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc3P49135 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc3P49135 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.61■□□□□ 0.73
Ercc3P49135 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ercc3P49135 Gm29518-201ENSMUST00000190858 372 ntBASIC19.61■□□□□ 0.73
Ercc3P49135 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.61■□□□□ 0.73
Ercc3P49135 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.61■□□□□ 0.73
Ercc3P49135 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.61■□□□□ 0.73
Ercc3P49135 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc3P49135 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc3P49135 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc3P49135 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc3P49135 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc3P49135 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.61■□□□□ 0.73
Ercc3P49135 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ercc3P49135 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.6■□□□□ 0.73
Ercc3P49135 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.6■□□□□ 0.73
Ercc3P49135 Gm17808-201ENSMUST00000200859 894 ntBASIC19.6■□□□□ 0.73
Ercc3P49135 Gm18421-201ENSMUST00000204122 625 ntBASIC19.6■□□□□ 0.73
Ercc3P49135 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ercc3P49135 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.6■□□□□ 0.73
Ercc3P49135 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc3P49135 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
Ercc3P49135 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ercc3P49135 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ercc3P49135 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.59■□□□□ 0.73
Ercc3P49135 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ercc3P49135 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ercc3P49135 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.59■□□□□ 0.73
Ercc3P49135 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.59■□□□□ 0.73
Ercc3P49135 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Ercc3P49135 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ercc3P49135 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.59■□□□□ 0.73
Ercc3P49135 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ercc3P49135 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ercc3P49135 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ercc3P49135 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ercc3P49135 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ercc3P49135 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ercc3P49135 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ercc3P49135 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ercc3P49135 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ercc3P49135 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ercc3P49135 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ercc3P49135 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ercc3P49135 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Gm6623-201ENSMUST00000173570 544 ntBASIC19.58■□□□□ 0.72
Ercc3P49135 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Gm18115-201ENSMUST00000221209 621 ntBASIC19.58■□□□□ 0.72
Ercc3P49135 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ercc3P49135 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Ercc3P49135 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ercc3P49135 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ercc3P49135 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc3P49135 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.57■□□□□ 0.72
Ercc3P49135 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc3P49135 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc3P49135 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ercc3P49135 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms