Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brca1P48754 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.51■□□□□ 0.55
Brca1P48754 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Brca1P48754 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brca1P48754 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Brca1P48754 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brca1P48754 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brca1P48754 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brca1P48754 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brca1P48754 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brca1P48754 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
Brca1P48754 Gm44872-201ENSMUST00000207864 420 ntBASIC18.51■□□□□ 0.55
Brca1P48754 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brca1P48754 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brca1P48754 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Brca1P48754 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Brca1P48754 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brca1P48754 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Brca1P48754 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.5■□□□□ 0.55
Brca1P48754 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brca1P48754 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brca1P48754 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brca1P48754 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Brca1P48754 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brca1P48754 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Brca1P48754 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brca1P48754 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.5■□□□□ 0.55
Brca1P48754 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.5■□□□□ 0.55
Brca1P48754 Gm27646-201ENSMUST00000183989 110 ntBASIC18.5■□□□□ 0.55
Brca1P48754 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brca1P48754 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.5■□□□□ 0.55
Brca1P48754 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brca1P48754 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.5■□□□□ 0.55
Brca1P48754 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Brca1P48754 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brca1P48754 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brca1P48754 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Brca1P48754 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brca1P48754 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.49■□□□□ 0.55
Brca1P48754 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brca1P48754 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Brca1P48754 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Brca1P48754 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Brca1P48754 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.49■□□□□ 0.55
Brca1P48754 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brca1P48754 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Brca1P48754 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Brca1P48754 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brca1P48754 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Brca1P48754 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Brca1P48754 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Brca1P48754 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brca1P48754 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brca1P48754 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brca1P48754 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brca1P48754 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brca1P48754 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brca1P48754 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Brca1P48754 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.48■□□□□ 0.55
Brca1P48754 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.48■□□□□ 0.55
Brca1P48754 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.48■□□□□ 0.55
Brca1P48754 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brca1P48754 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.48■□□□□ 0.55
Brca1P48754 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Brca1P48754 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.48■□□□□ 0.55
Brca1P48754 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Brca1P48754 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brca1P48754 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brca1P48754 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Brca1P48754 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Brca1P48754 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Brca1P48754 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.47■□□□□ 0.55
Brca1P48754 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brca1P48754 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Brca1P48754 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brca1P48754 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.47■□□□□ 0.55
Brca1P48754 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.47■□□□□ 0.55
Brca1P48754 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Brca1P48754 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brca1P48754 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Brca1P48754 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brca1P48754 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.47■□□□□ 0.55
Brca1P48754 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brca1P48754 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brca1P48754 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Brca1P48754 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Brca1P48754 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brca1P48754 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.46■□□□□ 0.55
Brca1P48754 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Brca1P48754 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.46■□□□□ 0.55
Brca1P48754 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.46■□□□□ 0.55
Brca1P48754 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brca1P48754 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brca1P48754 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brca1P48754 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brca1P48754 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brca1P48754 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Brca1P48754 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Brca1P48754 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brca1P48754 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms