Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx2-6P43688 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-6P43688 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-6P43688 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-6P43688 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-6P43688 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.62■□□□□ 0.09
Nkx2-6P43688 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Nkx2-6P43688 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-6P43688 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-6P43688 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Nkx2-6P43688 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-6P43688 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.62■□□□□ 0.09
Nkx2-6P43688 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-6P43688 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-6P43688 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx2-6P43688 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.61■□□□□ 0.09
Nkx2-6P43688 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Gm28659-201ENSMUST00000188013 759 ntBASIC15.61■□□□□ 0.09
Nkx2-6P43688 Gm44771-201ENSMUST00000206975 626 ntBASIC15.61■□□□□ 0.09
Nkx2-6P43688 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.61■□□□□ 0.09
Nkx2-6P43688 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx2-6P43688 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Haglr-201ENSMUST00000100000 2085 ntBASIC15.6■□□□□ 0.09
Nkx2-6P43688 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Rprl3-201ENSMUST00000157400 290 ntBASIC15.6■□□□□ 0.09
Nkx2-6P43688 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.6■□□□□ 0.09
Nkx2-6P43688 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.6■□□□□ 0.09
Nkx2-6P43688 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.6■□□□□ 0.09
Nkx2-6P43688 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.59■□□□□ 0.09
Nkx2-6P43688 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.59■□□□□ 0.09
Nkx2-6P43688 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
Nkx2-6P43688 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx2-6P43688 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.58■□□□□ 0.09
Nkx2-6P43688 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Nkx2-6P43688 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx2-6P43688 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Nkx2-6P43688 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nkx2-6P43688 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.58■□□□□ 0.08
Nkx2-6P43688 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms