Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
HttP42859 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.62■□□□□ 0.41
HttP42859 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.62■□□□□ 0.41
HttP42859 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.62■□□□□ 0.41
HttP42859 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HttP42859 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HttP42859 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HttP42859 Gm13365-201ENSMUST00000121188 973 ntBASIC17.61■□□□□ 0.41
HttP42859 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HttP42859 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HttP42859 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HttP42859 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HttP42859 Gm43474-201ENSMUST00000196415 774 ntBASIC17.61■□□□□ 0.41
HttP42859 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.61■□□□□ 0.41
HttP42859 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HttP42859 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HttP42859 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.61■□□□□ 0.41
HttP42859 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.61■□□□□ 0.41
HttP42859 Gm27437-201ENSMUST00000183429 107 ntBASIC17.61■□□□□ 0.41
HttP42859 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.61■□□□□ 0.41
HttP42859 Gm8655-201ENSMUST00000221159 852 ntBASIC17.61■□□□□ 0.41
HttP42859 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.61■□□□□ 0.41
HttP42859 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HttP42859 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.6■□□□□ 0.41
HttP42859 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Gm5866-201ENSMUST00000177881 973 ntBASIC17.6■□□□□ 0.41
HttP42859 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HttP42859 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
HttP42859 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.6■□□□□ 0.41
HttP42859 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
HttP42859 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.6■□□□□ 0.41
HttP42859 Gm45747-201ENSMUST00000212203 999 ntBASIC17.6■□□□□ 0.41
HttP42859 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HttP42859 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HttP42859 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.6■□□□□ 0.41
HttP42859 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HttP42859 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.6■□□□□ 0.41
HttP42859 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HttP42859 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.59■□□□□ 0.41
HttP42859 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HttP42859 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.59■□□□□ 0.41
HttP42859 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HttP42859 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HttP42859 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HttP42859 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HttP42859 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HttP42859 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HttP42859 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HttP42859 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HttP42859 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HttP42859 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HttP42859 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
HttP42859 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HttP42859 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HttP42859 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
HttP42859 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HttP42859 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HttP42859 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HttP42859 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HttP42859 Gm13223-201ENSMUST00000118609 747 ntBASIC17.58■□□□□ 0.4
HttP42859 Gm9172-201ENSMUST00000212092 954 ntBASIC17.58■□□□□ 0.4
HttP42859 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HttP42859 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HttP42859 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HttP42859 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HttP42859 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.58■□□□□ 0.4
HttP42859 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HttP42859 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HttP42859 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HttP42859 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.58■□□□□ 0.4
HttP42859 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
HttP42859 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HttP42859 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HttP42859 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HttP42859 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
HttP42859 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
HttP42859 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms