Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cxcl12P40224 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cxcl12P40224 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cxcl12P40224 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cxcl12P40224 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.04■□□□□ 0.32
Cxcl12P40224 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cxcl12P40224 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cxcl12P40224 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cxcl12P40224 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.04■□□□□ 0.32
Cxcl12P40224 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.04■□□□□ 0.32
Cxcl12P40224 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.04■□□□□ 0.32
Cxcl12P40224 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.04■□□□□ 0.32
Cxcl12P40224 Gm44872-201ENSMUST00000207864 420 ntBASIC17.04■□□□□ 0.32
Cxcl12P40224 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.04■□□□□ 0.32
Cxcl12P40224 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cxcl12P40224 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cxcl12P40224 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cxcl12P40224 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cxcl12P40224 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cxcl12P40224 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cxcl12P40224 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cxcl12P40224 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.04■□□□□ 0.32
Cxcl12P40224 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cxcl12P40224 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cxcl12P40224 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
Cxcl12P40224 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.03■□□□□ 0.32
Cxcl12P40224 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cxcl12P40224 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cxcl12P40224 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cxcl12P40224 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.03■□□□□ 0.32
Cxcl12P40224 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cxcl12P40224 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cxcl12P40224 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.03■□□□□ 0.32
Cxcl12P40224 Gm9172-201ENSMUST00000212092 954 ntBASIC17.03■□□□□ 0.32
Cxcl12P40224 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.03■□□□□ 0.32
Cxcl12P40224 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cxcl12P40224 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cxcl12P40224 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cxcl12P40224 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cxcl12P40224 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cxcl12P40224 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cxcl12P40224 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cxcl12P40224 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cxcl12P40224 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cxcl12P40224 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cxcl12P40224 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cxcl12P40224 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cxcl12P40224 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cxcl12P40224 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cxcl12P40224 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cxcl12P40224 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cxcl12P40224 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cxcl12P40224 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cxcl12P40224 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.02■□□□□ 0.32
Cxcl12P40224 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cxcl12P40224 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cxcl12P40224 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.02■□□□□ 0.32
Cxcl12P40224 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
Cxcl12P40224 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cxcl12P40224 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cxcl12P40224 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cxcl12P40224 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cxcl12P40224 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Cxcl12P40224 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cxcl12P40224 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cxcl12P40224 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cxcl12P40224 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cxcl12P40224 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.01■□□□□ 0.31
Cxcl12P40224 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.01■□□□□ 0.31
Cxcl12P40224 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.01■□□□□ 0.31
Cxcl12P40224 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.01■□□□□ 0.31
Cxcl12P40224 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.01■□□□□ 0.31
Cxcl12P40224 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Cxcl12P40224 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cxcl12P40224 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cxcl12P40224 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cxcl12P40224 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cxcl12P40224 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17■□□□□ 0.31
Cxcl12P40224 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cxcl12P40224 AC159114.1-201ENSMUST00000220349 266 ntBASIC17■□□□□ 0.31
Cxcl12P40224 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cxcl12P40224 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cxcl12P40224 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cxcl12P40224 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cxcl12P40224 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cxcl12P40224 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms