Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cdh4P39038 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdh4P39038 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Cdh4P39038 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.84■□□□□ 0.13
Cdh4P39038 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Cdh4P39038 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Gm5587-201ENSMUST00000206270 674 ntBASIC15.84■□□□□ 0.13
Cdh4P39038 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cdh4P39038 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cdh4P39038 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cdh4P39038 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Cdh4P39038 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdh4P39038 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh4P39038 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh4P39038 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.83■□□□□ 0.13
Cdh4P39038 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh4P39038 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh4P39038 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh4P39038 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Cdh4P39038 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cdh4P39038 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.83■□□□□ 0.12
Cdh4P39038 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.83■□□□□ 0.12
Cdh4P39038 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cdh4P39038 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cdh4P39038 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cdh4P39038 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cdh4P39038 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cdh4P39038 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cdh4P39038 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.81■□□□□ 0.12
Cdh4P39038 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdh4P39038 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.81■□□□□ 0.12
Cdh4P39038 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.81■□□□□ 0.12
Cdh4P39038 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.81■□□□□ 0.12
Cdh4P39038 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.81■□□□□ 0.12
Cdh4P39038 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.81■□□□□ 0.12
Cdh4P39038 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cdh4P39038 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdh4P39038 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cdh4P39038 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.8■□□□□ 0.12
Cdh4P39038 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cdh4P39038 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms