Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HmgclP38060 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HmgclP38060 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HmgclP38060 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HmgclP38060 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HmgclP38060 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HmgclP38060 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HmgclP38060 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.31■□□□□ 0.2
HmgclP38060 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HmgclP38060 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HmgclP38060 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HmgclP38060 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HmgclP38060 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HmgclP38060 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HmgclP38060 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HmgclP38060 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.3■□□□□ 0.2
HmgclP38060 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HmgclP38060 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HmgclP38060 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HmgclP38060 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.3■□□□□ 0.2
HmgclP38060 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HmgclP38060 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HmgclP38060 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.3■□□□□ 0.2
HmgclP38060 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.3■□□□□ 0.2
HmgclP38060 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HmgclP38060 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HmgclP38060 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HmgclP38060 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.29■□□□□ 0.2
HmgclP38060 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.29■□□□□ 0.2
HmgclP38060 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HmgclP38060 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HmgclP38060 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HmgclP38060 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.28■□□□□ 0.2
HmgclP38060 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HmgclP38060 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HmgclP38060 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HmgclP38060 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.28■□□□□ 0.2
HmgclP38060 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HmgclP38060 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HmgclP38060 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HmgclP38060 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HmgclP38060 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HmgclP38060 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
HmgclP38060 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HmgclP38060 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HmgclP38060 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HmgclP38060 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HmgclP38060 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HmgclP38060 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HmgclP38060 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms