Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox5P35710 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox5P35710 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox5P35710 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.08■□□□□ 0.48
Sox5P35710 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox5P35710 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox5P35710 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox5P35710 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sox5P35710 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox5P35710 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox5P35710 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sox5P35710 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox5P35710 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox5P35710 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox5P35710 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox5P35710 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sox5P35710 Mir1199-201ENSMUST00000117015 119 ntBASIC18.07■□□□□ 0.48
Sox5P35710 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.07■□□□□ 0.48
Sox5P35710 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.07■□□□□ 0.48
Sox5P35710 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sox5P35710 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox5P35710 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox5P35710 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sox5P35710 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox5P35710 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sox5P35710 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.07■□□□□ 0.48
Sox5P35710 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.06■□□□□ 0.48
Sox5P35710 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sox5P35710 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sox5P35710 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox5P35710 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox5P35710 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sox5P35710 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox5P35710 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Sox5P35710 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.05■□□□□ 0.48
Sox5P35710 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Sox5P35710 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox5P35710 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox5P35710 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sox5P35710 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sox5P35710 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Sox5P35710 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Sox5P35710 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sox5P35710 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sox5P35710 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Sox5P35710 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.04■□□□□ 0.48
Sox5P35710 Timm23-208ENSMUST00000226683 750 ntBASIC18.04■□□□□ 0.48
Sox5P35710 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sox5P35710 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Sox5P35710 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sox5P35710 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox5P35710 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox5P35710 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sox5P35710 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sox5P35710 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox5P35710 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox5P35710 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox5P35710 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox5P35710 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox5P35710 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox5P35710 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sox5P35710 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sox5P35710 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Sox5P35710 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.03■□□□□ 0.48
Sox5P35710 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sox5P35710 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms