Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa1P35582 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.31■□□□□ 0.04
Foxa1P35582 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa1P35582 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa1P35582 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Foxa1P35582 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa1P35582 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa1P35582 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa1P35582 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.31■□□□□ 0.04
Foxa1P35582 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Foxa1P35582 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa1P35582 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.31■□□□□ 0.04
Foxa1P35582 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Foxa1P35582 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa1P35582 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.31■□□□□ 0.04
Foxa1P35582 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.31■□□□□ 0.04
Foxa1P35582 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa1P35582 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Foxa1P35582 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa1P35582 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa1P35582 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Foxa1P35582 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Foxa1P35582 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.3■□□□□ 0.04
Foxa1P35582 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa1P35582 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa1P35582 Gm6659-201ENSMUST00000174752 547 ntBASIC15.3■□□□□ 0.04
Foxa1P35582 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.3■□□□□ 0.04
Foxa1P35582 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa1P35582 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa1P35582 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa1P35582 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa1P35582 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Foxa1P35582 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Foxa1P35582 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Foxa1P35582 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Foxa1P35582 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.29■□□□□ 0.04
Foxa1P35582 Gm23634-201ENSMUST00000175071 91 ntBASIC15.29■□□□□ 0.04
Foxa1P35582 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.29■□□□□ 0.04
Foxa1P35582 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.29■□□□□ 0.04
Foxa1P35582 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.29■□□□□ 0.04
Foxa1P35582 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Foxa1P35582 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.28■□□□□ 0.04
Foxa1P35582 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.28■□□□□ 0.04
Foxa1P35582 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.28■□□□□ 0.04
Foxa1P35582 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.28■□□□□ 0.04
Foxa1P35582 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Foxa1P35582 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxa1P35582 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Foxa1P35582 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Foxa1P35582 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxa1P35582 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Foxa1P35582 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Foxa1P35582 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Foxa1P35582 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.27■□□□□ 0.04
Foxa1P35582 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Foxa1P35582 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.27■□□□□ 0.04
Foxa1P35582 Gm29707-201ENSMUST00000196325 491 ntBASIC15.27■□□□□ 0.04
Foxa1P35582 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.27■□□□□ 0.04
Foxa1P35582 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Foxa1P35582 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Foxa1P35582 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Foxa1P35582 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Foxa1P35582 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms