Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.89□□□□□ -0.19
Rab3dP35276 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rab3dP35276 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rab3dP35276 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rab3dP35276 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.89□□□□□ -0.19
Rab3dP35276 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.89□□□□□ -0.19
Rab3dP35276 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Rab3dP35276 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.89□□□□□ -0.19
Rab3dP35276 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.89□□□□□ -0.19
Rab3dP35276 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rab3dP35276 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.88□□□□□ -0.19
Rab3dP35276 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Rab3dP35276 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rab3dP35276 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.88□□□□□ -0.19
Rab3dP35276 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.88□□□□□ -0.19
Rab3dP35276 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rab3dP35276 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Rab3dP35276 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Gm10138-203ENSMUST00000206952 366 ntBASIC13.88□□□□□ -0.19
Rab3dP35276 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rab3dP35276 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Rab3dP35276 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Rab3dP35276 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rab3dP35276 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Rab3dP35276 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab3dP35276 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Rab3dP35276 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.87□□□□□ -0.19
Rab3dP35276 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
Rab3dP35276 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rab3dP35276 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.87□□□□□ -0.19
Rab3dP35276 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rab3dP35276 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.86□□□□□ -0.19
Rab3dP35276 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab3dP35276 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab3dP35276 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab3dP35276 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab3dP35276 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab3dP35276 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms