Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.28□□□□□ -0.12
Slc6a1P31648 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Slc6a1P31648 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc6a1P31648 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Slc6a1P31648 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a1P31648 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a1P31648 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a1P31648 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a1P31648 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a1P31648 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a1P31648 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a1P31648 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Slc6a1P31648 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a1P31648 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.27□□□□□ -0.12
Slc6a1P31648 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a1P31648 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a1P31648 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a1P31648 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc6a1P31648 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.27□□□□□ -0.12
Slc6a1P31648 Gm12527-201ENSMUST00000117967 564 ntBASIC14.27□□□□□ -0.13
Slc6a1P31648 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.27□□□□□ -0.13
Slc6a1P31648 Gm10653-202ENSMUST00000139570 835 ntBASIC14.27□□□□□ -0.13
Slc6a1P31648 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.27□□□□□ -0.13
Slc6a1P31648 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a1P31648 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a1P31648 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.27□□□□□ -0.13
Slc6a1P31648 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Slc6a1P31648 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a1P31648 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a1P31648 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a1P31648 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a1P31648 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
Slc6a1P31648 Prob1-201ENSMUST00000097619 3021 ntBASIC14.27□□□□□ -0.13
Slc6a1P31648 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Slc6a1P31648 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a1P31648 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a1P31648 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a1P31648 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.27□□□□□ -0.13
Slc6a1P31648 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a1P31648 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc6a1P31648 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Slc6a1P31648 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Slc6a1P31648 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.26□□□□□ -0.13
Slc6a1P31648 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc6a1P31648 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc6a1P31648 Gm22240-201ENSMUST00000175225 82 ntBASIC14.26□□□□□ -0.13
Slc6a1P31648 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.26□□□□□ -0.13
Slc6a1P31648 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Slc6a1P31648 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Slc6a1P31648 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Slc6a1P31648 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a1P31648 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Slc6a1P31648 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Slc6a1P31648 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Slc6a1P31648 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.25□□□□□ -0.13
Slc6a1P31648 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Slc6a1P31648 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.25□□□□□ -0.13
Slc6a1P31648 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.25□□□□□ -0.13
Slc6a1P31648 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.25□□□□□ -0.13
Slc6a1P31648 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a1P31648 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Slc6a1P31648 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Slc6a1P31648 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms