Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Rprl3-201ENSMUST00000157400 290 ntBASIC16.44■□□□□ 0.22
Nckap1P28660 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.44■□□□□ 0.22
Nckap1P28660 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.44■□□□□ 0.22
Nckap1P28660 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.44■□□□□ 0.22
Nckap1P28660 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.44■□□□□ 0.22
Nckap1P28660 Mzt1-203ENSMUST00000227948 952 ntBASIC16.44■□□□□ 0.22
Nckap1P28660 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Nckap1P28660 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Nckap1P28660 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nckap1P28660 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Nckap1P28660 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Nckap1P28660 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.43■□□□□ 0.22
Nckap1P28660 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Nckap1P28660 Gm27459-201ENSMUST00000184860 107 ntBASIC16.43■□□□□ 0.22
Nckap1P28660 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Nckap1P28660 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.43■□□□□ 0.22
Nckap1P28660 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Nckap1P28660 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Nckap1P28660 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Nckap1P28660 Gm15372-201ENSMUST00000120729 834 ntBASIC16.42■□□□□ 0.22
Nckap1P28660 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nckap1P28660 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nckap1P28660 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Nckap1P28660 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nckap1P28660 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nckap1P28660 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Nckap1P28660 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.42■□□□□ 0.22
Nckap1P28660 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nckap1P28660 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.41■□□□□ 0.22
Nckap1P28660 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.41■□□□□ 0.22
Nckap1P28660 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Mir8098-201ENSMUST00000184011 137 ntBASIC16.41■□□□□ 0.22
Nckap1P28660 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.41■□□□□ 0.22
Nckap1P28660 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.41■□□□□ 0.22
Nckap1P28660 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Nckap1P28660 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Nckap1P28660 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Nckap1P28660 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nckap1P28660 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nckap1P28660 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nckap1P28660 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nckap1P28660 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.4■□□□□ 0.22
Nckap1P28660 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.4■□□□□ 0.22
Nckap1P28660 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nckap1P28660 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.4■□□□□ 0.22
Nckap1P28660 Gm5864-201ENSMUST00000202263 970 ntBASIC16.4■□□□□ 0.22
Nckap1P28660 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.4■□□□□ 0.22
Nckap1P28660 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nckap1P28660 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.4■□□□□ 0.22
Nckap1P28660 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nckap1P28660 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nckap1P28660 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nckap1P28660 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.4■□□□□ 0.22
Nckap1P28660 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nckap1P28660 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nckap1P28660 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Nckap1P28660 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nckap1P28660 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nckap1P28660 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nckap1P28660 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms