Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40lgP27548 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40lgP27548 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.26■□□□□ 0.03
Cd40lgP27548 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40lgP27548 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cd40lgP27548 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.26■□□□□ 0.03
Cd40lgP27548 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.26■□□□□ 0.03
Cd40lgP27548 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40lgP27548 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.26■□□□□ 0.03
Cd40lgP27548 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40lgP27548 Gm7977-201ENSMUST00000193787 748 ntBASIC15.26■□□□□ 0.03
Cd40lgP27548 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40lgP27548 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40lgP27548 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Cd40lgP27548 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40lgP27548 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40lgP27548 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40lgP27548 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Cd40lgP27548 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.26■□□□□ 0.03
Cd40lgP27548 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40lgP27548 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cd40lgP27548 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd40lgP27548 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd40lgP27548 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cd40lgP27548 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.25■□□□□ 0.03
Cd40lgP27548 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cd40lgP27548 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd40lgP27548 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cd40lgP27548 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.25■□□□□ 0.03
Cd40lgP27548 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd40lgP27548 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cd40lgP27548 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd40lgP27548 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cd40lgP27548 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.25■□□□□ 0.03
Cd40lgP27548 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd40lgP27548 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd40lgP27548 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.25■□□□□ 0.03
Cd40lgP27548 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.25■□□□□ 0.03
Cd40lgP27548 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.25■□□□□ 0.03
Cd40lgP27548 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd40lgP27548 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cd40lgP27548 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Cd40lgP27548 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd40lgP27548 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.24■□□□□ 0.03
Cd40lgP27548 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cd40lgP27548 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd40lgP27548 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd40lgP27548 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd40lgP27548 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd40lgP27548 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd40lgP27548 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.24■□□□□ 0.03
Cd40lgP27548 Gm7213-201ENSMUST00000215977 950 ntBASIC15.24■□□□□ 0.03
Cd40lgP27548 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd40lgP27548 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.24■□□□□ 0.03
Cd40lgP27548 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cd40lgP27548 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cd40lgP27548 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.24■□□□□ 0.03
Cd40lgP27548 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cd40lgP27548 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cd40lgP27548 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd40lgP27548 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cd40lgP27548 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cd40lgP27548 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cd40lgP27548 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cd40lgP27548 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.23■□□□□ 0.03
Cd40lgP27548 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cd40lgP27548 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40lgP27548 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cd40lgP27548 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40lgP27548 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40lgP27548 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.22■□□□□ 0.03
Cd40lgP27548 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Cd40lgP27548 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40lgP27548 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cd40lgP27548 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40lgP27548 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40lgP27548 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40lgP27548 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cd40lgP27548 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40lgP27548 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Cd40lgP27548 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40lgP27548 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40lgP27548 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cd40lgP27548 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms