Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.97□□□□□ -0.01
Cd40P27512 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.97□□□□□ -0.01
Cd40P27512 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.97□□□□□ -0.01
Cd40P27512 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.97□□□□□ -0.01
Cd40P27512 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.97□□□□□ -0.01
Cd40P27512 Gm6659-201ENSMUST00000174752 547 ntBASIC14.97□□□□□ -0.01
Cd40P27512 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.97□□□□□ -0.01
Cd40P27512 Gm7977-201ENSMUST00000193787 748 ntBASIC14.97□□□□□ -0.01
Cd40P27512 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.97□□□□□ -0.01
Cd40P27512 Gm5587-201ENSMUST00000206270 674 ntBASIC14.97□□□□□ -0.01
Cd40P27512 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.97□□□□□ -0.01
Cd40P27512 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Cd40P27512 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.96□□□□□ -0.01
Cd40P27512 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Cd40P27512 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cd40P27512 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.96□□□□□ -0.01
Cd40P27512 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cd40P27512 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cd40P27512 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.96□□□□□ -0.02
Cd40P27512 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cd40P27512 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Cd40P27512 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Cd40P27512 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cd40P27512 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Cd40P27512 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cd40P27512 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cd40P27512 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Gm25016-201ENSMUST00000158399 131 ntBASIC14.95□□□□□ -0.02
Cd40P27512 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.95□□□□□ -0.02
Cd40P27512 Gm23634-201ENSMUST00000175071 91 ntBASIC14.95□□□□□ -0.02
Cd40P27512 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cd40P27512 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.95□□□□□ -0.02
Cd40P27512 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cd40P27512 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cd40P27512 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cd40P27512 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40P27512 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40P27512 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40P27512 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40P27512 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40P27512 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40P27512 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40P27512 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40P27512 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cd40P27512 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.94□□□□□ -0.02
Cd40P27512 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.94□□□□□ -0.02
Cd40P27512 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.94□□□□□ -0.02
Cd40P27512 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40P27512 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40P27512 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40P27512 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Cd40P27512 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cd40P27512 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms