Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Tnfrsf1bP25119 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Tnfrsf1bP25119 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Mir770-201ENSMUST00000103252 94 ntBASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Tnfrsf1bP25119 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Gm6623-201ENSMUST00000173570 544 ntBASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Gm6345-202ENSMUST00000180900 204 ntBASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Gm29707-201ENSMUST00000196325 491 ntBASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Tnfrsf1bP25119 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Tnfrsf1bP25119 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms