Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf9P20334 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf9P20334 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.47□□□□□ -0.25
Tnfrsf9P20334 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Gm6623-201ENSMUST00000173570 544 ntBASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tnfrsf9P20334 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf9P20334 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf9P20334 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf9P20334 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf9P20334 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf9P20334 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf9P20334 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf9P20334 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Tnfrsf9P20334 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Tnfrsf9P20334 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.45□□□□□ -0.26
Tnfrsf9P20334 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Gm10566-201ENSMUST00000086739 996 ntBASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tnfrsf9P20334 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Gm27742-201ENSMUST00000184667 60 ntBASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms