Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl3P10855 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl3P10855 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccl3P10855 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl3P10855 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl3P10855 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccl3P10855 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl3P10855 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.61□□□□□ -0.07
Ccl3P10855 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl3P10855 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ccl3P10855 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl3P10855 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl3P10855 Gm15173-201ENSMUST00000122049 433 ntBASIC14.6□□□□□ -0.07
Ccl3P10855 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl3P10855 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.6□□□□□ -0.07
Ccl3P10855 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.6□□□□□ -0.07
Ccl3P10855 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccl3P10855 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl3P10855 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl3P10855 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Ccl3P10855 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.6□□□□□ -0.07
Ccl3P10855 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.6□□□□□ -0.07
Ccl3P10855 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl3P10855 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Ccl3P10855 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl3P10855 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Ccl3P10855 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Gm7230-201ENSMUST00000173026 815 ntBASIC14.59□□□□□ -0.07
Ccl3P10855 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.59□□□□□ -0.07
Ccl3P10855 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Ccl3P10855 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.59□□□□□ -0.07
Ccl3P10855 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Ccl3P10855 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.59□□□□□ -0.07
Ccl3P10855 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Ccl3P10855 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Ccl3P10855 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.58□□□□□ -0.07
Ccl3P10855 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccl3P10855 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Ccl3P10855 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl3P10855 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl3P10855 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl3P10855 Gm11779-201ENSMUST00000118541 368 ntBASIC14.58□□□□□ -0.08
Ccl3P10855 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccl3P10855 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.58□□□□□ -0.08
Ccl3P10855 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.58□□□□□ -0.08
Ccl3P10855 Gm2213-201ENSMUST00000197485 688 ntBASIC14.58□□□□□ -0.08
Ccl3P10855 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccl3P10855 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl3P10855 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl3P10855 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl3P10855 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccl3P10855 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.58□□□□□ -0.08
Ccl3P10855 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccl3P10855 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.58□□□□□ -0.08
Ccl3P10855 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.57□□□□□ -0.08
Ccl3P10855 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccl3P10855 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccl3P10855 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.57□□□□□ -0.08
Ccl3P10855 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.57□□□□□ -0.08
Ccl3P10855 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.57□□□□□ -0.08
Ccl3P10855 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccl3P10855 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccl3P10855 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccl3P10855 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms