Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ccl1P10146 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ccl1P10146 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccl1P10146 Mir2861-201ENSMUST00000175539 82 ntBASIC12.9□□□□□ -0.34
Ccl1P10146 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccl1P10146 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccl1P10146 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccl1P10146 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccl1P10146 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccl1P10146 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.89□□□□□ -0.35
Ccl1P10146 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccl1P10146 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.88□□□□□ -0.35
Ccl1P10146 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccl1P10146 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.88□□□□□ -0.35
Ccl1P10146 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccl1P10146 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccl1P10146 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.88□□□□□ -0.35
Ccl1P10146 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ccl1P10146 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ccl1P10146 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccl1P10146 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.87□□□□□ -0.35
Ccl1P10146 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccl1P10146 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccl1P10146 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccl1P10146 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.87□□□□□ -0.35
Ccl1P10146 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.87□□□□□ -0.35
Ccl1P10146 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccl1P10146 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ccl1P10146 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms