Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.37□□□□□ -0.11
PtcraP0C6B2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Gm37722-201ENSMUST00000193757 208 ntBASIC14.37□□□□□ -0.11
PtcraP0C6B2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.37□□□□□ -0.11
PtcraP0C6B2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Gm9013-201ENSMUST00000132939 882 ntBASIC14.36□□□□□ -0.11
PtcraP0C6B2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.36□□□□□ -0.11
PtcraP0C6B2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
PtcraP0C6B2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.35□□□□□ -0.11
PtcraP0C6B2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.34□□□□□ -0.11
PtcraP0C6B2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PtcraP0C6B2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PtcraP0C6B2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
PtcraP0C6B2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms