Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
P06336 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.27■□□□□ 0.04
P06336 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Gm9013-201ENSMUST00000132939 882 ntBASIC15.27■□□□□ 0.04
P06336 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.27■□□□□ 0.03
P06336 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.27■□□□□ 0.03
P06336 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P06336 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
P06336 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.26■□□□□ 0.03
P06336 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
P06336 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
P06336 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
P06336 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 AA414768-201ENSMUST00000121924 1257 ntBASIC15.26■□□□□ 0.03
P06336 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
P06336 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.26■□□□□ 0.03
P06336 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.26■□□□□ 0.03
P06336 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
P06336 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
P06336 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
P06336 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
P06336 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
P06336 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
P06336 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.25■□□□□ 0.03
P06336 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.25■□□□□ 0.03
P06336 Gm5587-201ENSMUST00000206270 674 ntBASIC15.25■□□□□ 0.03
P06336 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.25■□□□□ 0.03
P06336 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.25■□□□□ 0.03
P06336 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
P06336 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
P06336 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
P06336 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.24■□□□□ 0.03
P06336 Gm25016-201ENSMUST00000158399 131 ntBASIC15.24■□□□□ 0.03
P06336 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.24■□□□□ 0.03
P06336 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
P06336 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Gm7977-201ENSMUST00000193787 748 ntBASIC15.24■□□□□ 0.03
P06336 Gm29707-201ENSMUST00000196325 491 ntBASIC15.24■□□□□ 0.03
P06336 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
P06336 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.24■□□□□ 0.03
P06336 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.24■□□□□ 0.03
P06336 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.24■□□□□ 0.03
P06336 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P06336 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms