Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.73■□□□□ 0.27
PdgfrbP05622 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PdgfrbP05622 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PdgfrbP05622 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PdgfrbP05622 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PdgfrbP05622 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PdgfrbP05622 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
PdgfrbP05622 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PdgfrbP05622 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
PdgfrbP05622 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PdgfrbP05622 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PdgfrbP05622 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PdgfrbP05622 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
PdgfrbP05622 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.71■□□□□ 0.27
PdgfrbP05622 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.71■□□□□ 0.27
PdgfrbP05622 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PdgfrbP05622 Gm18115-201ENSMUST00000221209 621 ntBASIC16.71■□□□□ 0.27
PdgfrbP05622 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PdgfrbP05622 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PdgfrbP05622 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PdgfrbP05622 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PdgfrbP05622 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PdgfrbP05622 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PdgfrbP05622 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
PdgfrbP05622 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.71■□□□□ 0.26
PdgfrbP05622 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PdgfrbP05622 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PdgfrbP05622 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PdgfrbP05622 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PdgfrbP05622 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.7■□□□□ 0.26
PdgfrbP05622 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PdgfrbP05622 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Gm11336-201ENSMUST00000118168 334 ntBASIC16.7■□□□□ 0.26
PdgfrbP05622 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Gm22697-201ENSMUST00000175194 63 ntBASIC16.7■□□□□ 0.26
PdgfrbP05622 Mir7071-201ENSMUST00000184847 69 ntBASIC16.7■□□□□ 0.26
PdgfrbP05622 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.7■□□□□ 0.26
PdgfrbP05622 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.7■□□□□ 0.26
PdgfrbP05622 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.7■□□□□ 0.26
PdgfrbP05622 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PdgfrbP05622 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PdgfrbP05622 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
PdgfrbP05622 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.69■□□□□ 0.26
PdgfrbP05622 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PdgfrbP05622 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.69■□□□□ 0.26
PdgfrbP05622 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Gm44450-201ENSMUST00000199528 114 ntBASIC16.69■□□□□ 0.26
PdgfrbP05622 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.69■□□□□ 0.26
PdgfrbP05622 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PdgfrbP05622 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
PdgfrbP05622 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms