Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a1P02463 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a1P02463 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC20.28■□□□□ 0.84
Col4a1P02463 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a1P02463 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a1P02463 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a1P02463 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.28■□□□□ 0.84
Col4a1P02463 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a1P02463 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col4a1P02463 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a1P02463 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a1P02463 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a1P02463 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a1P02463 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a1P02463 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a1P02463 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.27■□□□□ 0.84
Col4a1P02463 Gm14140-201ENSMUST00000119999 995 ntBASIC20.27■□□□□ 0.84
Col4a1P02463 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a1P02463 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Col4a1P02463 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Col4a1P02463 Gm27646-201ENSMUST00000183989 110 ntBASIC20.27■□□□□ 0.84
Col4a1P02463 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.27■□□□□ 0.84
Col4a1P02463 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.27■□□□□ 0.84
Col4a1P02463 AV026068-213ENSMUST00000223675 1171 ntBASIC20.27■□□□□ 0.84
Col4a1P02463 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a1P02463 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.27■□□□□ 0.84
Col4a1P02463 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a1P02463 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col4a1P02463 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col4a1P02463 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col4a1P02463 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Col4a1P02463 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a1P02463 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.26■□□□□ 0.83
Col4a1P02463 Gm12260-201ENSMUST00000122447 411 ntBASIC20.26■□□□□ 0.83
Col4a1P02463 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC20.26■□□□□ 0.83
Col4a1P02463 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.26■□□□□ 0.83
Col4a1P02463 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Col4a1P02463 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a1P02463 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a1P02463 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a1P02463 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Col4a1P02463 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a1P02463 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.26■□□□□ 0.83
Col4a1P02463 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.26■□□□□ 0.83
Col4a1P02463 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.26■□□□□ 0.83
Col4a1P02463 Gm27702-201ENSMUST00000184512 56 ntBASIC20.26■□□□□ 0.83
Col4a1P02463 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a1P02463 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a1P02463 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col4a1P02463 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Col4a1P02463 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a1P02463 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a1P02463 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a1P02463 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.25■□□□□ 0.83
Col4a1P02463 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a1P02463 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a1P02463 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Col4a1P02463 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a1P02463 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a1P02463 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a1P02463 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.25■□□□□ 0.83
Col4a1P02463 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.25■□□□□ 0.83
Col4a1P02463 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.25■□□□□ 0.83
Col4a1P02463 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col4a1P02463 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a1P02463 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a1P02463 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.24■□□□□ 0.83
Col4a1P02463 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a1P02463 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Col4a1P02463 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a1P02463 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Col4a1P02463 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Col4a1P02463 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.24■□□□□ 0.83
Col4a1P02463 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Col4a1P02463 Mir6404-201ENSMUST00000183699 94 ntBASIC20.24■□□□□ 0.83
Col4a1P02463 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Col4a1P02463 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Col4a1P02463 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a1P02463 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a1P02463 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a1P02463 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a1P02463 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Col4a1P02463 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a1P02463 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col4a1P02463 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a1P02463 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a1P02463 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a1P02463 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Col4a1P02463 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.23■□□□□ 0.83
Col4a1P02463 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.23■□□□□ 0.83
Col4a1P02463 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.23■□□□□ 0.83
Col4a1P02463 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a1P02463 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a1P02463 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.23■□□□□ 0.83
Col4a1P02463 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a1P02463 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a1P02463 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a1P02463 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a1P02463 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col4a1P02463 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms