Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Vti1aO89116 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.82■□□□□ 0.44
Vti1aO89116 Gm44771-201ENSMUST00000206975 626 ntBASIC17.82■□□□□ 0.44
Vti1aO89116 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.82■□□□□ 0.44
Vti1aO89116 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.82■□□□□ 0.44
Vti1aO89116 Mzt1-203ENSMUST00000227948 952 ntBASIC17.82■□□□□ 0.44
Vti1aO89116 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.82■□□□□ 0.44
Vti1aO89116 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vti1aO89116 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vti1aO89116 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vti1aO89116 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vti1aO89116 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vti1aO89116 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.81■□□□□ 0.44
Vti1aO89116 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.81■□□□□ 0.44
Vti1aO89116 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.81■□□□□ 0.44
Vti1aO89116 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.81■□□□□ 0.44
Vti1aO89116 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.81■□□□□ 0.44
Vti1aO89116 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Vti1aO89116 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vti1aO89116 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.8■□□□□ 0.44
Vti1aO89116 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vti1aO89116 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Vti1aO89116 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Vti1aO89116 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Vti1aO89116 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Vti1aO89116 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Vti1aO89116 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.8■□□□□ 0.44
Vti1aO89116 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Vti1aO89116 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vti1aO89116 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vti1aO89116 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vti1aO89116 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Vti1aO89116 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Vti1aO89116 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Vti1aO89116 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
Vti1aO89116 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Vti1aO89116 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vti1aO89116 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Vti1aO89116 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.78■□□□□ 0.44
Vti1aO89116 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Vti1aO89116 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Vti1aO89116 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.78■□□□□ 0.44
Vti1aO89116 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Vti1aO89116 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms